
Hastings-Metropolis Monte Carlo ML method, version 1.3

Locus 1

   5 Sequences,   20 Sites

Base Frequencies:

   A       0.25000
   C       0.25000
   G       0.25000
  T(U)     0.25000
Transition/transversion ratio =   2.000000
(Transition/transversion parameter =   1.500000)

Watterson estimate of theta is  0.14400000
Single chain point estimate of theta (from final chain)=  0.22163024
Combined point estimate of theta =   0.22366490, lnL =   0.00155245

 There were  10 short runs; each producing     20.0 trees
 There were   2 long runs; each producing   1000.0 trees

   Theta       LnL
   -----       ---
  0.00100000  -147.01726020
  0.00200000  -68.99243742
  0.00500000  -24.17915318
  0.01000000  -10.79131736
  0.02000000   -5.38520829
  0.05000000   -2.36182016
  0.10000000   -0.72533856
  0.19932573   -0.01270310
  0.20000000   -0.01187544
  0.22366490    0.00155245
  0.22817770    0.00112926
  0.50000000   -0.63627222
  1.00000000   -2.06294279
  2.00000000   -4.07067151
  5.00000000   -7.24483334
 10.00000000   -9.84834246

